Data supporting Thesis INCREASING RESISTANCE TO DROUGHT AND SALT STRESS BY EXPLOITING NATURAL VARIATION IN ABSCISIC ACID (ABA) BIOSYNTHESIS

Date

2021-11-03 00:33

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Publisher

Cranfield University

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Format

Free to read from

Citation

MacLeod, Kyle (2020). Data supporting Thesis INCREASING RESISTANCE TO DROUGHT AND SALT STRESS BY EXPLOITING NATURAL VARIATION IN ABSCISIC ACID (ABA) BIOSYNTHESIS. Cranfield Online Research Data (CORD). Dataset. https://doi.org/10.17862/cranfield.rd.13181975

Abstract

Data to supplement Thesis Chapter 3: nced_multi_mapped_unique.fasta; Protein alignment_thesis.pdf; Protein alignment_thesis.png; Tree_circle_matrix_high res.pdf Chapter 4: All NILs heatmap genome.pdf; z-score_introgression_data.txt Chapter 5: Leaf-ABA data for the NILs and positive control.xlsx; Root-ABA data for the NILs and positive control.xlsx; Leaf-ABA data for segregating population of S.penLA716 NIL.xlsx Chapter 6: ABA and gene expression of A3070, AC and Spenn NILs.xlsx; Salt stress experiment.xlsx; Seed ABA content and germination.xlsx; SlNCED1 promoter alignmnet of the NCED NILs.fasta; SlNCED1 promoter alignmnet of the NCED NILs.geneious Supplementary data: Supplementary File S1_SlNCED1 promoter alignment - resequenced accessions and NILs.pdf Supplementary File S2_Genes_within_introgression_all_NILs.xlsx Supplementary File S3_SlNCED1 promoter alignmnet of the NCED NILs.pdf Supplementary Table S1.xlsx

Description

Software Description

Software Language

Github

Keywords

genotyping-by-sequencing (GBS)', 'Near-isogenic line (NIL)', 'Abscisic acid', 'allelic variation', 'NCED', 'tomato', 'ABA metabolites', '9 cis epoxycarotenoid dioxygenase', 'Bioinformatics', 'Molecular Biology', 'Plant Biology', 'Plant Physiology'

DOI

10.17862/cranfield.rd.13181975

Rights

CC BY-NC 4.0

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