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Item Open Access Engineering biology applications for environmental solutions: potential and challenges(Springer Nature, 2025-04) Lea-Smith, David J.; Hassard, Francis; Coulon, Frederic; Partridge, Natalie; Horsfall, Louise; Parker, Kyle D. J.; Smith, Robert D. J.; McCarthy, Ronan R.; McKew, Boyd A.; Gutierrez, Tony; Kumar, Vinod; Dotro, Gabriella; Yang, Zhugen; Curtis, Thomas P.; Golyshin, Peter; Heaven, Sonia; Jefferson, Bruce; Jeffrey, Paul; Jones, Davey L.; Le Corre Pidou, Kristell; Liu, Yongqiang; Lyu, Tao; Smith, Cindy; Yakunin, Alexander; Zhang, Yue; Krasnogor, NatalioEngineering biology applies synthetic biology to address global environmental challenges like bioremediation, biosequestration, pollutant monitoring, and resource recovery. This perspective outlines innovations in engineering biology, its integration with other technologies (e.g., nanotechnology, IoT, AI), and commercial ventures leveraging these advancements. We also discuss commercialisation and scaling challenges, biosafety and biosecurity considerations including biocontainment strategies, social and political dimensions, and governance issues that must be addressed for successful real-world implementation. Finally, we highlight future perspectives and propose strategies to overcome existing hurdles, aiming to accelerate the adoption of engineering biology for environmental solutions.Item Open Access An analysis of factors that influence the spatial pattern of faecal matter flow in unsewered cities(Elsevier, 2025-05-25) Sultana, M. Sufia; Waine, Toby W.; Bari, Niamul; Tyrrel, SeanThe management of sanitation systems in unsewered cities in low and middle income countries is a critical issue, yet it is unclear where the risk hotspots are and where interventions should be focused. This study utilised a prototype model, developed by the authors, to map the spatial pattern of faecal flow in Rajshahi city, a secondary city in northwest Bangladesh with a population around a million. This city serves as a representative example of 60 such secondary cities in Bangladesh and hundreds more in the economically developing region in Asia, Africa and Latin America. The model relies on assumptions that carry significant uncertainties; hence, the study employed a sensitivity analysis with multiple plausible scenarios to characterise these uncertainties, aiming to identify ways to improve the model further. Five major influencing factors on the spatial pattern of faecal flow were identified: the emptying of septic tanks, the use of soak pits, and sludge removal from drains, variations in faecal matter production by building types, and the presence or absence of toilets. These factors were shown to collectively have a significant impact (almost 50 % changed) on the model outcome, depending upon the assumptions made. The study offers insights that will guide future data collection efforts by emphasising the need to understand these specific influencing factors and their spatial pattern. Consequently, this research has broader implications for urban sanitation management as well as associated public health research like wastewater surveillance, risk assessment, and disease dynamics in similar urban settings, offering insights into areas of uncertainty that need to be addressed in future modelling efforts.Item Open Access Investigation on the protection ability of two commonly packaging methods to apples during express transportation(Elsevier, 2025-03-01) Yu, Jincheng; Qiang, Hongli; Shi, Mingwei; Li, Zhiguo; Fadiji, Tobi; Wani, Ali Abas; Burgeon, ClémentPackaging plays a vital role in the post-harvest sales process of apples. This study conducted express transportation tests to evaluate the protective effectiveness of two commonly used packaging methods for apples. Key parameters assessed included real-time changes in temperature, humidity, vibration load, and CO₂ levels inside the packaging boxes during transit, as well as the storage quality of apples after transportation. Results showed significant variations in load distribution within corrugated partition-based cardboard boxes (CP combination packaging). Conversely, foam holder-based cardboard boxes (FP combination packaging) exhibited CO₂ accumulation. Furthermore, mechanical damage was predominantly localized to the fruit belly. Compared to CP combination packaging box, FP combination packaging box provided more stable shock resistance at lower vibration forces (< 10 N) across transit routes, likely due to its EPS foam design, which restricted fruit movement and absorbed external vibrations. Post-storage analysis showed that damaged apples experienced a 0.16 % increase in mass loss, a 0.83 % rise in soluble solids content (SSC), and a 0.19 MPa reduction in firmness compared to undamaged controls. These findings provide valuable insights into optimizing packaging design to minimize transport-induced damage and enhance apple preservation.Item Open Access Municipal wastewater treatment with anaerobic membrane Bioreactors for non-potable reuse: a review(Taylor & Francis, 2024-05-18) Huang, Yu; Jeffrey, Paul; Pidou, MarcAnaerobic membrane bioreactors (AnMBRs) are seen as a promising technology for application in water reuse schemes. However, the evidence base for their potential and efficacy in this regard is fragmented. We draw together this disparate knowledge base to offer a state of the art review of municipal wastewater treatment with AnMBRs and evaluate the technology’s potential application for water reuse. Water quality regulations and standards from different regions of the world are used as performance metrics to compare and contrast the treatment performance of pilot and laboratory scale AnMBR systems reported in the literature (n = 50). Findings indicate that under stable operation, AnMBRs have the potential to produce water for agricultural reuse. However, without post-treatment, AnMBRs are incapable of delivering water that meets other non-potable reuse standards across a range of important parameters such as COD, BOD5, NH3-N and TP. Analysis of key operational parameters determine the operation of AnMBR for non-potable reuse purpose cover influent water matrix, pH, temperature, hydraulic retention time, system and membrane configuration. An assessment of candidate post-treatment technologies suggests a tradeoff between the cost and effluent quality based on the reuse application requirement. We conclude by discussing a number of challenges and limitations to the use of AnMBRs for reuse applications in order to outline a pathway to maturity for effective treatment trains.Item Open Access Artificial intelligence for prediction of shelf-life of various food products: recent advances and ongoing challenges(Elsevier, 2025-05-01) Rashvand, Mahdi; Ren, Yuqiao; Sun, Da-Wen; Senge, Julia; Krupitzer, Christian; Fadiji, Tobi; Miró, Marta Sanzo; Shenfield, Alex; Watson, Nicholas J.; Zhang, HongweiBackground: Accurate estimation of shelf-life is essential to maintain food safety, reduce wastage, and improve supply chain efficiency. Traditional methods such as microbial and chemical analysis, and sensory evaluation provide reproducible results but require time and labor and may not be suitable for real-time or high-throughput applications. The integration of artificial intelligence (AI) with advanced analysis techniques offers a suitable alternative for rapid, data-driven estimation of shelf-life in dynamic storage environments. Approach and scope: The current review assesses the application of AI-based techniques such as machine learning (ML), deep learning (DL), and hybrid approaches in food product shelf life prediction. This study highlights how AI can be utilized to examine data from non-destructive testing methods like hyperspectral imaging, spectroscopy, machine vision, and electronic sensors to enhance predictive performance. The review also describes how AI-based techniques contribute to managing food quality, reduce economic losses, and enhance sustainability by ensuring optimized food distribution and reducing waste. Key findings and conclusions: AI techniques overcome conventional techniques by considering intricate, multi-sourced information capturing microbiological, biochemical, and environmental factors influencing food spoilage. Meat, dairy, fruits and vegetables, and beverage case studies illustrate AI techniques' superiority in real-time monitoring and quality assessment. It also identifies limitations such as data availability, model generalizability, and computational cost, constraining extensive applications. Cloud and Internet of Things (IoT) platform integration into future applications has to be considered to enable real-time decision-making and adaptive modeling. AI can be a paradigm-changing tool in food industries with intelligent, scalable, and low-cost interventions in food safety, waste reduction, and sustainability.Item Open Access Enhancing process monitoring and control in novel carbon capture and utilization biotechnology through artificial intelligence modeling: an advanced approach toward sustainable and carbon-neutral wastewater treatment(Elsevier, 2025-05) Cairone, Stefano; Oliva, Giuseppina; Romano, Fabiana; Pasquarelli, Federica; Mariniello, Aniello; Zorpas, Antonis A.; Pollard, Simon J. T.; Choo, Kwang-Ho; Belgiorno, Vincenzo; Zarra, Tiziano; Naddeo, VincenzoIntegrating carbon capture and utilization (CCU) technologies into wastewater treatment plants (WWTPs) is essential for mitigating greenhouse gas (GHG) emissions and enhancing environmental sustainability, but further advancements in process monitoring and control are critical to optimizing treatment performance. This study investigates the application of artificial intelligence (AI) modeling to enhance process monitoring and control in a novel integrated CCU biotechnology with a moving bed biofilm reactor (MBBR) sequenced with an algal photobioreactor (aPBR). This system reduces GHG and odour emissions simultaneously. Several machine learning (ML) models, including artificial neural networks (ANNs), support vector machines (SVM), random forest (RF), and least-squares boosting (LSBoost), were tested. The LSBoost was the most suitable for modeling the MBBR + aPBR system, exhibiting the highest accuracy in predicting CO2 (R2 = 0.97) and H2S (R2 = 0.95) emissions from the MBBR. LSBoost also achieved the highest accuracy for predicting CO2 (R2 = 0.85) and H2S (R2 = 0.97) outlet concentrations from the aPBR. These findings underscore the importance of aligning AI algorithms to the characteristics of the treatment technology. The proposed AI models outperformed conventional statistical methods, demonstrating their ability to capture the complex, nonlinear dynamics typical of processes in environmental technologies. This study highlights the potential of AI-driven monitoring and control systems to significantly improve the efficiency of CCU biotechnologies in WWTPs for climate change mitigation and sustainable wastewater management.Item Open Access Circular bioeconomy and sustainable food systems: what are the possible mechanisms?(Elsevier, 2025-07-01) Nguyen, Thi Hoa; Wang, Xinfang; Utomo, Dhanan; Gage, Ewan; Xu, BingThe circular bioeconomy has emerged as a promising pathway for sustainable development, yet its specific role in fostering sustainable food systems remains underexplored. To our best knowledge, this study is the first systematic review to examine how the circular bioeconomy contributes to sustainable food practices. Using content analysis of 111 academic papers from SCOPUS database, we identify key mechanisms through which the circular bioeconomy enhances food safety and security. These include the development of innovative food products manufactured from bio-resources, the extension of product life through utilizing biodegradable films and bio-based compounds, and the improvement of food safety via sustainable packaging. Additionally, circular bioeconomy practices increase agricultural productivity by enhancing crop yields. From a corporate perspective, they optimize resource use, boost profitability, and generate new revenue streams from waste. Socially, these practices improve stakeholder wellbeing and generate employment opportunities. Environmentally, they support natural capital regeneration, reduce ecological footprints, and promote the sustainable use of resources. Despite these benefits, significant research gaps remain, particularly regarding the cross-sectoral relationships and multi-level impacts of circular bioeconomy practices. This study provides actionable implications for policymakers, practitioners, and researchers, emphasizing regulatory development, strategic decision making, and future research on corporate-level impacts.