Staff publications - Cranfield Health

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Open Access
Assessment of the environmental toxicity and carcinogenicity of tungsten-based shot.
(Elsevier, 2009-05) Thomas, Vernon G.; Roberts, Michael J.; Harrison, Paul T. C.
The toxicity of elemental tungsten released from discharged shot was assessed against previous studies that established a 1% toxic threshold for soil organisms. Extremely heavy theoretical shot loadings of 69,000 shot/ha were used to generate estimated environmental concentrations (EEC) for two brands of tungsten-based shot containing 51% and 95% tungsten. The corresponding tungsten EEC values were 6.5–13.5 mg W/kg soil, far below the 1% toxic threshold. The same shot loading in water produced tungsten EEC values of 2.1–4.4 mg W/L, levels that are not toxic under experimental conditions. Pure tungsten has not been shown to exhibit carcinogenic properties when ingested or embedded in animal tissues, but nickel, with which it is often alloyed, has known carcinogenicity. Given the large number of waterfowl that carry shot embedded in their body, it is advisable to screen lead shot substitutes for their carcinogenic potential through intra-muscular implantation.
Open Access
Biofuelcells-Recent advances and applications
(Elsevier, 2007-02-15) Davis, Frank; Higson, Seamus P. J.
In 2006, the journal Biosensors and Bioelectronics published a special issue devoted exclusively to biofuel cells, including several research papers and an extensive review of the field [Bullen, R.A., Arnot, T.C., Lakeman, J.B., Walsh, F.C., 2006. Biosens. Bioelectron.]. Within this review a brief description will firstly be given of the history of biofuel cells together with coverage of some of the major historical advances. The review is intended, however, to largely concentrate on and give an overview of the advances made in recent years in this area together with a discussion surrounding the practical application of biofuel cells. There are several classes of biofuel cells: we shall firstly discuss the recent advances in biofuel cells that convert chemical fuels to produce electrical power by use of catalytic enzymes. This will be followed by a section on similar cells where micro-organisms rather than enzymes are used to convert the fuel to energy. Thirdly we shall consider hybrid biofuel cells that combine the utilisation of photochemical chemistries and biological systems for the generation of electricity. Finally we will discuss some of the proposed uses of biofuel cells together with a short consideration of future research possibilities and applications of these systems.
Open Access
Comparing the antimicrobial effectiveness of NaCl and KCl with a view to salt/sodium replacement.
(Elsevier, 2008-05-10) Bidlas, Eva; Lambert, Ronald J. W.
A study using a small range of pathogenic bacterial species (Aeromonas hydrophila, Enterobacter sakazakii, Shigella flexneri, Yersinia enterocolitica and 3 strains of Staphylococcus aureus) has shown that potassium chloride has an equivalent antimicrobial effect on these organisms when calculated on a molar basis. Combined NaCl and KCl experiments were carried out and data was analysed using a modification to the Lambert and Lambert [Lambert, R.J.W., and Lambert, R., 2003. A model for the efficacy of combined inhibitors. Journal of Applied Microbiology 95, 734–743.] model for combined inhibitors and showed that in combination KCl is a direct 1:1 molar replacement for the antimicrobial effect of common salt. If this is a general finding then, where salt is used to help preserve a product, partial or complete replacement by KCl is possible.
Open Access
Development of a disposable pyruvate biosensor to determine pungency in onions (Allium cepa L.)
(Elsevier, 2006-05-15) Abayomi, Louise Anike; Terry, Leon A; White, S. F.; Warner, P. J.
A disposable prototype pyruvate biosensor was constructed using pyruvate oxidase immobilised on mediated meldolas blue electrodes to determine pungency in onions (Allium cepa L.). The optimum operating potential was +150 mV (versus Ag/AgCl). A strong correlation between the biosensor response and untreated onion juice of known pyruvate concentration 2–12 μmol/g fresh weight (FW) was demonstrated. The biosensor was able to differentiate between low and high pungency onions. The detection limit using 1 unit of pyruvate oxidase was 1–2 μmol/g FW. Optimum concentrations of co-factors TPP, FAD and MgSO4 comprising the enzyme cocktail were determined as being 0.04, 0.1 and 30 mM, respectively.
Open Access
Effect of solute and matric potential on in vitro growth and sporulation of strains from a new population of Aspergillus flavus isolated in Italy.
(Elsevier, 2008-05) Giorni, Paola; Battilani, Paola; Magan, Naresh
The effect of temperature and different solute (Ψs) and matric potentials (Ψm) on growth and sporulation of three aflatoxigenic strains of Aspergillus flavus isolated from contaminated maize in northern Italy was determined. The Ψs of maize-based media were modified ionically (NaCl) and non-ionically (glycerol) and the Ψm with PEG 8000 in the range −1.4 to −21.0 MPa at 25 and 30 °C. Both temperature and Ψs/Ψm stress had statistically significant effects on growth rates of the three strains. Faster growth occurred at 30 °C and −1.4 and −2.8 MPa. A. flavus strains were more sensitive to Ψm than Ψs stress with limits of −9.8 MPa and −14 to−18 MPa, respectively. Sporulation was significantly influenced by Ψs potential, solute type and temperature. This suggests that these aflatoxigenic strains of A. flavus isolated from aflatoxin-contaminated maize are probably able to colonise crop debris rapidly at prevailing temperatures and water stress conditions. This type of information on the ecology of aflatoxin producing A. flavus strains isolated in Italy will contribute to the development of a systems model to predict their activity in crop residue and colonisation of maize grain.
Open Access
Electrochemical Immunoassay for Free Prostate Specific Antigen (f-PSA) Using Magnetic Beads
(Wiley InterScience, 2008) Sarkar, P.; Ghosh, D.; Bhattacharyay, D.; Setford, S. J.; Turner, Anthony P. F.
Prostate specific antigen (PSA) is a prominent marker for the prostate carcinoma. It is found in human blood in free (f-PSA) and complex forms. These two forms together are called total PSA (t-PSA). Estimation of both forms is essential to predict malignancy. In this study we report a unique and effective technique of electrochemical detection of f-PSA using magnetic beads on a three-electrode screen-printed sensor. A magnetic bead enzyme linked immunosorbent assay (ELISA) was performed in a cuvette. Following the immunoassay, magnetic beads were recovered by a magnetic concentrator and transferred on the working electrode of the 3-electrode assembly. The amperometric response, a measure of the amount of residual enzyme activity on the beads and hence the concentration of analyte in solution, was determined by addition of enzyme substrate. The device has a detection limit of <0.1 ng mL-1 f-PSA and a linear range of 0 to 1 ng mL-1 f-PSA.
Open Access
Environmental factors affect efficacy of some essential oils and resveratrol to control growth and ochratoxin A production by Penicillium verrucosum and Aspergillus westerdijkiae on wheat grain.
(Elsevier, 2008) Aldred, David; Cairns-Fuller, Victoria; Magan, Naresh
This study determined the efficacy of three essential oils (bay, clove and cinnamon oil) and the antioxidant resveratrol (0–500 μg g−1) on the control of growth and ochratoxin A (OTA) production by Penicillium verrucosum and Aspergillus westerdijkiae (=A. ochraceus) under different water activity (aw, 0.90, 0.95, 0.995), and temperature (15, 25 °C) conditions on irradiated wheat grain. The most effective treatment (resveratrol) was then tested on natural grain. The ED50 values for growth inhibition by the oils were 200–300 μg g−1 at the aw and the temperatures tested. For resveratrol, this varied from <50 μg g−1 at 0.90–0.95 aw to >350 at 0.995aw at both temperatures. The ED50 values for the control of OTA were slightly lower than for control of growth, with approx. 200 μg g−1 required for the oils and 50–100 μg g−1 of the antioxidant, at 0.90/0.95aw and both temperatures. In wet grain (0.995aw), higher concentrations were required. For growth there were statistically significant effects of single-, two- and three-way interactions between treatments except for concentration×temperature and concentration×temperature×essential oil/antioxidant treatment. For OTA control, statistically significant treatments were aw, temperature×aw, concentration×temperature, treatment×concentration, and three-way interaction of concentration×aw×treatment for P. verrucosum and A. westerdijkiae. Subsequent studies were done with the best treatment (resveratrol, 200 μg g−1) on natural wheat grain with either P. verrucosum or A. westerdijkiae at 0.85–0.995aw and 15/25 °C over 28 days storage. This showed that the populations of the mycotoxigenic species and OTA contamination could be reduced by >60% by this treatment at the end of the storage period.
Open Access
Environmental factors modify carbon nutritional patterns and niche overlap between Aspergillus flavus and Fusarium verticillioides strains from maize.
(Elsevier, 2009-04-15) Giorni, Paola; Magan, Naresh; Battilani, Paola
This study examined the utilization patterns of key carbon sources (CS, 24: including key sugars, amino acids and fatty acids) in maize by strains of Aspergillus flavus and Fusarium verticillioides under different water activity (aw, 0.87–0.98 aw) and temperature (20–35 °C) values and compared the niche overlap indices (NOI) that estimate the in vitro CS utilization profiles [Wilson, M., Lindow, S.E., 1994. Coexistence among epiphytic bacterial populations mediated through nutritional resource partitioning. Applied and Environmental Microbiology 60, 4468–4477.]. The ability to grow in these key CS in minimal media was studied for 120 h in 12 h steps. The NOI was calculated for inter-species (F. verticillioides–A. flavus) and for intra-species (A. flavus–A. flavus) using CS utilization patterns over the range of interacting environmental conditions. 30 °C, over the whole aw range examined, was found to be optimal for utilization of the maximum number of CS by A. flavus. In contrast, for F. verticillioides this was more so at 20 °C; 25 °C allowed a suboptimal usage of CS for both species. NOIs confirmed the nutritional dominance of A. flavus at 30 °C, especially at lower aw levels and that of F. verticillioides at 20 °C, mainly at 0.95 aw. In other conditions of aw, based on CS utilization patterns, the data indicated that A. flavus and F. verticillioides occupied different ecological niches. The variability in nutritional sources utilization between A. flavus strains was not related to their ability to produce aflatoxins (AFs). This type of data helps to explain the nutritional dominance of fungal species and strains under different environmental conditions. This could be useful in trying to find appropriate natural biocontrol microorganisms to compete with these mycotoxigenic species.
Open Access
Evaluation of an FIA Operated Amperometric Bacterial Biosensor, Based on Pseudomonas Putida F1 for the Detection of Benzene, Toluene, Ethylbenzene, and Xylenes (BTEX)
(Taylor and Francis, 2005) Rasinger, Josef D.; Marrazza, Giovanna; Briganti, Fabrizio; Scozzafava, Andrea; Mascini, Marco; Turner, Anthony P. F.
Recently, the development and optimization of a flow injection analysis (FIA) operated bacterial biosensor based on the aerobic catabolism of Pseudomonas putida ML2 was reported in the literature (Lanyon et al. 2004, 2005). By adapting information from these reports, we investigated whether operating parameters and procedures of the benzene biosensor could be directly applied to a new system based on a different bacterial strain for the detection of the whole benzene, toluene, ethylbenzene, and xylenes range. Cells of the investigated bacterial strain, Pseudomonas putida F1, were immobilized between two cellulose acetate membranes and fixed onto a Clark dissolved oxygen electrode. The P. putida F1 aerobically degrades benzene, toluene, and ethylbenzene (BTE) (Cho et al. 2000). The BTE biosensor in kinetic mode FIA displayed a linear range of 0.02-0.14 mM benzene (response time: 5 min, base-line recovery time: 15 min), 0.05-0.2 mM toluene (response time: 8 min, baseline recovery time: 20 min), and 0.1-0.2 mM ethylbenzene (response time: 12 min, baseline recovery time: 30 min), respectively. Due to the differences in sensitivity, response, and baseline recovery times for BTE, it was possible to differentiate each compound in mixtures of these volatile organic compounds (VOCs). No response for xylenes could be obtained since they cannot be completely metabolized by this bacterial strain. However, it was reported that the range of compounds degradable by P. putida F1 can possibly be expanded by cultivating the cells on different carbon sources (Choi et al. 2003). The sensor showed good intra- and interassay reproducibility, and all obtained results were comparable with those reported in the literature. The demonstrated reproducibility and the simplicity and ease of use as well as the portability for in situ measurements indicates that the biosensor could be suitable as a reliable initial warning device for elevated BTE levels in indoor and outdoor environments.
Open Access
An explanation for the effect of inoculum size on MIC and the growth/no growth interface.
(Elsevier, 2008-08-15) Bidlas, Eva; Du, Tingting; Lambert, Ronald J. W.
The inoculum effect (IE) is the phenomenon observed where changes in the inoculum size used in an experiment alters the outcome with respect to, for example, the minimum inhibitory concentration of an antimicrobial or the growth/no growth boundary for a given set of environmental conditions. Various hypotheses exist as to the cause of the IE such as population heterogeneity and quorum sensing, as well as the null hypothesis — that it is artefactual. Time to detection experiments (TTD) were carried out on different initial inoculum sizes of several bacterial species (Aeromonas hydrophila, Enterobacter sakazakii, Salmonella Poona, Escherichia coli and Listeria innocua) when challenged with different pH and with combined pH and sodium acetate. Data were modelled using a modification to a Gamma model (Lambert and Bidlas 2007, Int. J. Food Microbiology 115, 204–213), taking into account the inoculum size dependency on the TTD obtained under ideal conditions. The model suggests that changes in minimum inhibitory concentration (MIC) or in the growth–no growth boundary with respect to inoculum size are due to using a smaller or larger inoculum (i.e. is directly related to microbial number) and is not due to other, suggested, phenomena. The model used further suggests that the effect of a changing inoculum size can be modelled independently of any other factor, which implies that a simple 1 to 2-day experiment measuring the TTD of various initial inocula can be used as an adjunct to currently available models.
Open Access
Fungal volatile fingerprints: discrimination between dermatophyte species and strains by means of an electronic nose.
(Elsevier, 2008-04-14) Sahgal, Natasha; Magan, Naresh
The potential of an electronic nose (e-nose) consisting of a hybrid gas sensor array system has been examined for species discrimination and strain identification of dermatophytes which are causative pathogens for human and animal infection. Temporal volatile production patterns have been studied at a species level for a Microsporum species, two Trichophyton species and at a strain level for the two Trichophyton species. After about 120 h principal component analysis (PCA) and cluster analysis showed possible discrimination between the species from controls. Data analysis also indicated probable differentiation between the strains of T. rubrum. The same could not however be achieved for the strains of T. mentagrophytes during preliminary experiments for the same time period, signifying a good similarity between the strains of this particular species based on their volatile fingerprints. This study suggests that volatile production patterns shows promise for species and strain identification of these dermatophytic fungi thereby facilitating early diagnosis and early management of patients.
Open Access
Home blood glucose biosensors: a commercial perspective
(Elsevier, 2005-06-15) Newman, Jeffrey D.; Turner, Anthony P. F.
Twenty years on from a review in the first issue of this journal, this contribution revisits glucose sensing for diabetes with an emphasis on commercial developments in the home blood glucose testing market. Following a brief introduction to the needs of people with diabetes, the review considers defining technologies that have enabled the introduction of commercial products and then reviews the products themselves. Drawing heavily on the performance of actual instruments and publicly available information from the companies themselves, this work is designed to complement more conventional reviews based on papers published in scholarly journals. It focuses on the commercial reality today and the products that we are likely to see in the near future.
Open Access
Impact of Trametes versicolor and Phanerochaete chrysosporium on differential breakdown of pesticide mixtures in soil microcosms at two water potentials and associated respiration and enzyme activity.
(Elsevier, 2008-12) Fragoeiro, Silvia; Magan, Naresh
This study has examined the effect of inoculation of soil microcosms with Trametes versicolor and Phanerochaete chrysosporium on wood chips on differential degradation of pesticides (simazine, trifluralin and dieldrin, 10 mg kg−1 soil) at two water potentials (−0.7 and −2.8 MPa) at 15 °C. The soil microcosms were destructively sampled after 6/12 weeks and four extracellular enzymes quantified, respiration and pesticides measured with GC and HPLC. The fungal treatments produced extracellular enzymes in soil. Respiratory activity was significantly (P = 0.05) enhanced in soil with the inocula, and higher in the pesticide mixtures. Cellulase/dehydrogenase increased in inoculated soil. Laccase increased significantly in the T. versicolor treatment. Degradation of the three pesticides by wood chip addition alone was enhanced (20–30%). T. versicolor increased degradation of simazine (27–46%), trifluralin (5–17%) and dieldrin (5–11%) and P. chrysosporium by 34–48%, 0–30% and 40–46%, respectively, when compared with controls after 12 weeks. This study has demonstrated that pesticide mixtures are differentially degraded by fungal inoculants and significant extracellular enzymes are produced in soil, even at −2.8 MPa water potential. This suggests that effective bioremediation of xenobiotic mixtures using wood chips and fungal inoculants is achievable over a relatively wide water potential range when compared with that allowing plant growth (−1.4 MPa).
Open Access
Nano-Porous Light-Emitting Silicon Chip as a Potential Biosensor Platform
(Taylor and Francis, 2008-01) Zhang, Juankun; Zhang, Weiliang; Dong, Shanmu; Turner, Anthony P. F.; Fan, Qingjie; Jia, Shiru
Nano-porous silicon (PS) offers a potential platform for biosensors with benefits both in terms of light emission and the large functional surface area. A light emitting PS chip with a stable and functional surface was fabricated in our laboratory. When protein was deposited on it, the light emission was reduced in proportion to the protein concentration. Based on this property, we developed a rudimentary demonstration of a label-free sensor to detect bovine serum albumin (BSA). A serial concentration of BSA was applied to the light chip and the reduction in light emission was measured. The reduction of the light intensity was linearly related to the concentration of the BSA at concentrations below 10-5 M. The detection limit was 8×10-9 M.
Open Access
A novel optical biosensor format for the detection of clinically relevant TP53 mutations
(Elsevier, 2005-05-15) Wilson, P. K.; Jiang, T.; Minunni, Maria E.; Turner, Anthony P. F.; Mascini, Marco
The TP53 gene has been the subject of intense research since the realisation that inactivation of this gene is common to most cancer types. Numerous publications have linked TP53 mutations in general or at specific locations to patient prognosis and therapy response. The findings of many studies using general approaches such as immunohistochemistry or sequencing are contradictory. However, the detection of specific mutations, especially those occurring in the structurally important L2 and L3 zinc binding domains, which are the most common sites of TP53 mutations, have been linked to patient prognosis and more strongly to radiotherapy and chemotherapy resistance in several major cancers. In this study, the TI-SPR-1 surface plasmon resonance system and Texas Instruments Spreeta™ chips were used to develop a DNA biosensor based on thiolated probes complementary to these domains. The sensors were able to detect these mutations in both oligonucleotides and PCR products with normal and mutant TP53 DNA, but the difference in hybridisation signal was small. Preliminary experiments to enhance the signal using Escherichia coli mismatch repair proteins, MutS and single strand binding protein were carried out. It was found that MutS was unable to bind to mismatch oligonucleotides, but single strand binding protein was able to bind to single stranded probes, which had not hybridised to the target, resulting in a three-fold increase in the sensitivity of the biosensor. While further work needs to be carried out to optimise the system, these preliminary experiments indicate that the TI-SPR-1 can be used for the detection of clinically relevant mutations in the TP53 gene and that the sensitivity can be increased significantly using single strand binding protein. This system has a number of advantages over current mutation detection technologies, including lower cost, ease of sensor preparation and measurement procedures, technical simplicity and increased speed due to the lack of need for gel electrophoresis.
Open Access
Physiological manipulation and formulation of the biocontrol yeast Pichia anomala for control of Penicillium verrucosum and ochratoxin A contamination of moist grain.
(Taylor and Francis, 2008) Mokiou, Stella; Magan, Naresh
The major hurdle in the production of commercial biocontrol agents (BCAs) has been the lack of production of appropriate formulations. Of particular importance is the conservation of viability and ecological competence after application. With this in mind studies were conducted to develop formulations of P. anomala which would have these attributes. Cells were grown in molasses-based medium modified with proline to different water availability levels (0.98 and 0.96) which significantly increased (up to 50%) the content of trehalose and arabitol in the yeast cells during liquid broth fermentation. The use of isotonic solutions for harvesting the yeast cells further increased the endogenous content of these compatible solutes as well as glycerol. Fluidised bed drying of cells at 30-80°C was carried out for 10 and 20 min and showed that viability was significantly decreased at 70-80°C. A temperature of 50°C for 20 min was found to be best for viability (70%) and moisture content of <10%. Several additives for conservation of viability showed that cotton seed flour+skimmed milk was the best treatment when dried at 50°C. The biocontrol efficacy of formulated P. anomala cells was tested in laboratory scale studies and this showed that they inhibited growth of Penicillium verrucosum and reduce ochratoxin A production in moist wheat grain under some combinations of water availability. Physiologically modified formulated yeast cells with increased levels of trehalose and arabitol gave similar efficacy as fresh cells. This suggests that ecophysiological manipulation of such BCAs can result in improved ecological competence of such formulations and effective biocontrol.
Open Access
Post-harvest control strategies: Minimizing mycotoxins in the food chain.
(Elsevier, 2007-10-20) Magan, Naresh; Aldred, David
Contamination of cereal commodities by moulds and mycotoxins results in dry matter, quality, and nutritional losses and represents a significant hazard to the food chain. Most grain is harvested, dried and then stored on farm or in silos for medium/long term storage. Cereal quality is influenced by a range of interacting abiotic and biotic factors. In the so-called stored grain ecosystem, factors include grain and contaminant mould respiration, insect pests, rodents and the key environmental factors of temperature, water availability and intergranular gas composition, and preservatives which are added to conserve moist grain for animal feed. Thus knowledge of the key critical control points during harvesting, drying and storage stages in the cereal production chain are essential in developing effective prevention strategies post-harvest. Studies show that very small amounts of dry matter loss due to mould activity can be tolerated. With < 0.5% dry matter loss visible moulding, mycotoxin contamination and downgrading of lots can occur. The key mycotoxigenic moulds in partially dried grain are Penicillium verrucosum (ochratoxin) in damp cool climates of Northern Europe, and Aspergillus flavus (aflatoxins), A. ochraceus (ochratoxin) and some Fusarium species (fumonisins, trichothecenes) on temperate and tropical cereals. Studies on the ecology of these species has resulted in modelling of germination, growth and mycotoxin minima and prediction of fungal contamination levels which may lead to mycotoxin contamination above the tolerable legislative limits (e.g. for ochratoxin). The effect of modified atmospheres and fumigation with sulphur dioxide and ammonia have been attempted to try and control mould spoilage in storage. Elevated CO2 of > 75% are required to ensure that growth of mycotoxigenic moulds does not occur in partially dried grain. Sometimes, preservatives based on aliphatic acids have been used to prevent spoilage and mycotoxin contamination of stored commodities, especially feed. These are predominantly fungistats and attempts have been made to use alternatives such as essential oils and anti-oxidants to prevent growth and mycotoxin accumulation in partially dried grain. Interactions between spoilage and mycotoxigenic fungi and insect pests inevitably occurs in stored grain ecosystems and this can further influence contamination with mycotoxins. Effective post-harvest management of stored commodities requires clear monitoring criteria and effective implementation in relation to abiotic and biotic factors, hygiene and monitoring to ensure that mycotoxin contamination is minimised and that stored grain can proceed through the food chain for processing.
Open Access
Potential for detection of microorganisms and heavy metals in potable water using electronic nose technology.
(Elsevier, 2003-05) Canhoto, Olinda; Magan, Naresh
Studies have been carried out to determine the potential for the detection of different microbial species (Enterobacter aerogenes, Escherichia coli, Pseudomonas aeruginosa), alone and in the presence of low concentrations of different heavy metals (As, Cd, Pb and Zn) in bottled, reverse osmosis (RO) and tap water, using an electronic nose. Studies show that it is possible to discriminate control water samples from water contaminated with 0.5 ppm of a mixture of metals. The presence of heavy metals may modify the activity of microorganisms and thus the volatile production patterns. Bacterial species at 102–104 colony forming units (CFUs) ml−1 could be detected after 24 h of incubation. Work is in progress to identify the limits of detection for a range of other microorganisms, including, fungi and cyanobacteria, and chlorinated phenols using electronic nose technology.
Open Access
Table olives volatile fingerprints: Potential of an electronic nose for quality discrimination.
(Elsevier, 2008-09-25) Panagou, Efstathios Z.; Sahgal, Natasha; Magan, Naresh; Nychas, George-John E.
In the present work, the potential of an electronic nose to differentiate the quality of fermented green table olives based on their volatile profile was investigated. An electronic gas sensor array system comprising a hybrid sensor array of 12 metal oxide and 10 metal ion-based sensors was used to generate a chemical fingerprint (pattern) of the volatile compounds present in olives. Multivariate statistical analysis and artificial neural networks were applied to the generated patterns to achieve various classification tasks. Green olives were initially classified into three major classes (acceptable, unacceptable, marginal) based on a sensory panel. Multivariate statistical approach showed good discrimination between the class of unacceptable samples and the classes of acceptable and marginal samples. However, in the latter two classes there was a certain area of overlapping in which no clear differentiation could be made. The potential to discriminate green olives in the three selected classes was also evaluated using a multilayer perceptron (MLP) neural network as a classifier with an 18–15–8–3 structure. Results showed good performance of the developed network as only two samples were misclassified in a 66-sample training dataset population, whereas only one case was misclassified in a 12-sample test dataset population. The results of this study provide promising perspectives for the use of a low-cost and rapid system for quality differentiation of fermented green olives based on their volatile profile.
Open Access
Trametes versicolor: Potential for atrazine bioremediation in calcareous clay soil, under low water availability conditions.
(Elsevier, 2009-06) Bastos, Ana Catarina; Magan, Naresh
This study examined the feasibility of Trametes versicolor to actively degrade atrazine (0.5 μg g−1) in non-sterile calcareous clay soil (Algarve, Portugal) microcosms for up to 24 weeks (20 °C), under low water availability (soil water potentials of −0.7 and −2.8 MPa). Soil respiration, laccase activity, and atrazine quantification by high-performance liquid chromatography (HPLC) were assessed. Respiration was significantly (p < 0.05) enhanced in soil containing the inoculant, particularly in the presence of atrazine, indicating that it remained metabolically active throughout the study. Furthermore, up to 98% and 85% (at −0.7 and −2.8 MPa, respectively) of atrazine was degraded in soil containing both the atrazine and the inoculant, compared to 96% and 50% in soil containing atrazine only. The contribution of T. versicolor to atrazine degradation was only significant (p < 0.005) under the driest soil treatment conditions. The strategies used for enhancing colonisation and biodegradation capabilities of the inoculant, as well as the selection of sawdust as carrier, were thus effective. However, there were no differences (p > 0.05) in quantified laccase activity in soil containing the inoculant and the control. Overall, this study demonstrated that T. versicolor was a strong candidate for atrazine bioremediation in soil with low moisture and organic matter contents, such as that found in semi-arid and Mediterranean-like ecosystems.