Browsing by Author "Wang, Yongtian"
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Item Open Access Automatic 2-D/3-D vessel enhancement in multiple modality images using a weighted symmetry filter(IEEE, 2017-09-26) Zhao, Yitian; Zhao, Yitian; Zheng, Yalin; Liu, Yonghuai; Zhao, Yifan; Luo, Lingling; Yang, Siyuan; Na, Tong; Wang, Yongtian; Liu, JiangAutomated detection of vascular structures is of great importance in understanding the mechanism, diagnosis and treatment of many vascular pathologies. However, automatic vascular detection continues to be an open issue because of difficulties posed by multiple factors such as poor contrast, inhomogeneous backgrounds, anatomical variations, and the presence of noise during image acquisition. In this paper, we propose a novel 2D/3D symmetry filter to tackle these challenging issues for enhancing vessels from different imaging modalities. The proposed filter not only considers local phase features by using a quadrature filter to distinguish between lines and edges, but also uses the weighted geometric mean of the blurred and shifted responses of the quadrature filter, which allows more tolerance of vessels with irregular appearance. As a result, this filter shows a strong response to the vascular features under typical imaging conditions. Results based on 8 publicly available datasets (six 2D datasets, one 3D dataset and one 3D synthetic dataset) demonstrate its superior performance to other state-ofthe- art methods.Item Open Access A compactness based saliency approach for leakages detection in fluorescein angiogram(Springer Verlag, 2016-07-26) Zhao, Yitian; Su, Pan; Yang, Jian; Zhao, Yifan; Zheng, Yalin; Wang, YongtianThis study has developed a novel saliency detection method based on compactness feature for detecting three common types of leakage in retinal fluorescein angiogram: large focal, punctate focal, and vessel segment leakage. Leakage from retinal vessels occurs in a wide range of retinal diseases, such as diabetic maculopathy and paediatric malarial retinopathy. The proposed framework consists of three major steps: saliency detection, saliency refinement and leakage detection. First, the Retinex theory is adapted to address the illumination inhomogeneity problem. Then two saliency cues, intensity and compactness, are proposed for the estimation of the saliency map of each individual superpixel at each level. The saliency maps at different levels over the same cues are fused using an averaging operator. Finally, the leaking sites can be detected by masking the vessel and optic disc regions. The effectiveness of this framework has been evaluated by applying it to different types of leakage images with cerebral malaria. The sensitivity in detecting large focal, punctate focal and vessel segment leakage is 98.1, 88.2 and 82.7 %, respectively, when compared to a reference standard of manual annotations by expert human observers. The developed framework will become a new powerful tool for studying retinal conditions involving retinal leakage.Item Open Access Intensity and compactness enabled saliency estimation for leakage detection in diabetic and malarial retinopathy(Institute of Electrical and Electronics Engineers, 2016-07-21) Zhao, Yitian; Zheng, Yalin; Liu, Yonghuai; Yang, Jian; Zhao, Yifan; Chen, Duanduan; Wang, YongtianLeakage in retinal angiography currently is a key feature for confirming the activities of lesions in the management of a wide range of retinal diseases, such as diabetic maculopathy and paediatric malarial retinopathy. This paper proposes a new saliency-based method for the detection of leakage in fluorescein angiography. A superpixel approach is firstly employed to divide the image into meaningful patches (or superpixels) at different levels. Two saliency cues, intensity and compactness, are then proposed for the estimation of the saliency map of each individual superpixel at each level. The saliency maps at different levels over the same cues are fused using an averaging operator. The two saliency maps over different cues are fused using a pixel-wise multiplication operator. Leaking regions are finally detected by thresholding the saliency map followed by a graph-cut segmentation. The proposed method has been validated using the only two publicly available datasets: one for malarial retinopathy and the other for diabetic retinopathy. The experimental results show that it outperforms one of the latest competitors and performs as well as a human expert for leakage detection and outperforms several state-of-the-art methods for saliency detection.Item Open Access Region-based saliency estimation for 3D shape analysis and understanding(Elsevier, 2016-02-01) Zhao, Yitian; Liu, Yonghuai; Wang, Yongjun; Wei, Baogang; Yang, Jian; Zhao, Yifan; Wang, YongtianThe detection of salient regions is an important pre-processing step for many 3D shape analysis and understanding tasks. This paper proposes a novel method for saliency detection in 3D free form shapes. Firstly, we smooth the surface normals by a bilateral filter. Such a method is capable of smoothing the surfaces and retaining the local details. Secondly, a novel method is proposed for the estimation of the saliency value of each vertex. To this end, two new features are defined: Retinex-based Importance Feature (RIF) and Relative Normal Distance (RND). They are based on the human visual perception characteristics and surface geometry respectively. Since the vertex based method cannot guarantee that the detected salient regions are semantically continuous and complete, we propose to refine such values based on surface patches. The detected saliency is finally used to guide the existing techniques for mesh simplification, interest point detection, and overlapping point cloud registration. The comparative studies based on real data from three publicly accessible databases show that the proposed method usually outperforms five selected state of the art ones both qualitatively and quantitatively for saliency detection and 3D shape analysis and understanding.Item Open Access Retinal vascular segmentation using superpixel-based line operator and its application to vascular topology estimation(2018-05-09) Na, Tong; Xie, Jianyang; Zhao, Yitian; Zhao, Yifan; Liu, Yue; Wang, Yongtian; Liu, JiangPurpose: Automatic methods of analyzing of retinal vascular networks, such as retinal blood vessel detection, vascular network topology estimation, and arteries / veins classi cation are of great assistance to the ophthalmologist in terms of diagnosis and treatment of a wide spectrum of diseases. Methods: We propose a new framework for precisely segmenting retinal vasculatures, constructing retinal vascular network topology, and separating the arteries and veins. A non-local total variation inspired Retinex model is employed to remove the image intensity inhomogeneities and relatively poor contrast. For better generalizability and segmentation performance, a superpixel based line operator is proposed as to distinguish between lines and the edges, thus allowing more tolerance in the position of the respective contours. The concept of dominant sets clustering is adopted to estimate retinal vessel topology and classify the vessel network into arteries and veins. Results: The proposed segmentation method yields competitive results on three pub- lic datasets (STARE, DRIVE, and IOSTAR), and it has superior performance when com- pared with unsupervised segmentation methods, with accuracy of 0.954, 0.957, and 0.964, respectively. The topology estimation approach has been applied to ve public databases 1 (DRIVE,STARE, INSPIRE, IOSTAR, and VICAVR) and achieved high accuracy of 0.830, 0.910, 0.915, 0.928, and 0.889, respectively. The accuracies of arteries / veins classi cation based on the estimated vascular topology on three public databases (INSPIRE, DRIVE and VICAVR) are 0.90.9, 0.910, and 0.907, respectively. Conclusions: The experimental results show that the proposed framework has e ectively addressed crossover problem, a bottleneck issue in segmentation and vascular topology recon- struction. The vascular topology information signi cantly improves the accuracy on arteries / veins classi cation.Item Open Access Saliency driven vasculature segmentation with infinite perimeter active contour model(Elsevier, 2017-02-22) Zhao, Yitian; Zhao, Jingliang; Yang, Jian; Liu, Yonghuai; Zhao, Yifan; Zheng, Yalin; Xia, Likun; Wang, YongtianAutomated detection of retinal blood vessels plays an important role in advancing the understanding of the mechanism, diagnosis and treatment of cardiovascular disease and many systemic diseases, such as diabetic retinopathy and age-related macular degeneration. Here, we propose a new framework for precisely segmenting retinal vasculatures. The proposed framework consists of three steps. A non-local total variation model is adapted to the Retinex theory, which aims to address challenges presented by intensity inhomogeneities, and the relatively low contrast of thin vessels compared to the background. The image is then divided into superpixels, and a compactness-based saliency detection method is proposed to locate the object of interest. For better general segmentation performance, we then make use of a new infinite active contour model to segment the vessels in each superpixel. The proposed framework has wide applications, and the results show that our model outperforms its competitors.